CR Name:
Species:    Tissue or Cell:

Welcome to CR Cistrome !

CR Cistrome is a unique database integrating curated information of CRs, CR ChIP-seq datasets, CR related HM ChIP-seq datasets, and analysis of the relationship between CRs and HMs ChIP-seq pairs in human and mouse.

Recently, we predicted non-classical function and co-factor candidates of histone modification regulators (HMRs, including readers, writers and erasers) using our new developed computational framwork ncHMR_detector. And we showed all significant candidates in the last navigation bar of the following summary part.

About CR

CRs are expressed in a tissue-specific manner and play important roles in normal physiology and disease.Hundreds of chromatin regulators (CRs) control chromatin structure and function by catalyzing and binding histone modifications.

Summary

  • Chromosome Regulator (59)
  • Species (2)
  • Cell line (132)
  • Cell type (53)
  • Non-classical function candidates
Dataset by chromosome regulator

News archive

v1.4.0 (2019.05.15) Added non-classical functions and co-factor candidates of histone modification regulators (HMRs, including reader, writer and eraser) predicted by ncHMR detector in GM12878, K562, hESC and mESC.

v1.3.0 (2018.09.10) Optimized website interface design and fixed bugs.

v1.2.0 (2017.10.23) Added more chromosome regulators datasets and analysis results.

v1.1.0 (2017.01.15) Re-analyzed all datasets based on new UCSC genome version mm10 and hg38,and added more datasets.

v1.0.0 (2013.11.18) The first released version, which included 194 datasets of 36 chromatin regulators and 177 histone modification datasets.

How to cite CR Cistrome

Please cite this paper if you use CR Cistrome in your study:
Wang Q, Huang J, Sun H, Liu J, Wang J, Wang Q, Qin Q, Mei S, Zhao C, Yang X, Liu XS, Zhang Y. "CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse". Nucleic Acids Res., 2013. PMID: 24253304

Figure Gallery

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About Chromatin Regulator

Chromatin Regulator Cistrome
is a unique database integrating curated information of CRs, CR ChIP-seq datasets, CR related HM ChIP-seq datasets, and analysis of the relationship between CRs and HMs ChIP-seq pairs in human and mouse.

Contact

zhaoweiyu [at] tongji dot edu dot cn